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    Serine carboxypeptidase S28 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832349, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine carboxypeptidase S28 family protein
    Primary source
    TAIR:AT5G22860
    Locus tag
    AT5G22860
    See related
    Araport:AT5G22860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRN17.9; MRN17_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (7639076..7643170, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene ncRNA Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343774.1
    NM_001343775.1
    NM_001343776.1
    NM_001343777.1
    NM_001343778.1
    NM_001343779.1
    NM_122191.3
    NM_180728.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type exopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Serine carboxypeptidase S28 family protein
    NP_001318624.1
    • Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1206 Blast hits to 1180 proteins in 169 species: Archae - 0; Bacteria - 11; Metazoa - 595; Fungi - 183; Plants - 236; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
    NP_851059.1
    • Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1224 Blast hits to 1198 proteins in 170 species: Archae - 0; Bacteria - 11; Metazoa - 605; Fungi - 185; Plants - 238; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7639076..7643170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180728.3 → NP_851059.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851059.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y6M9, A0A654G3I1, Q9FFC2
      Conserved Domains (1) summary
      cl21494
      Location:61 → 480
      Abhydrolase; alpha/beta hydrolases

    2. NM_001343775.1 → NP_001330608.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBB9, A0A5S9Y6M9

    3. NM_122191.3 → NP_197677.2  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197677.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y6M9, F4KBC9
      Conserved Domains (1) summary
      cl21494
      Location:61 → 439
      Abhydrolase; alpha/beta hydrolases

    4. NM_001343774.1 → NP_001318624.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y6M9, F4KBC9

    5. NM_001343776.1 → NP_001330609.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UD15, A0A1P8BBC5

    6. NM_001343778.1 → NP_001330607.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UD15, A0A1P8BBC5

    7. NM_001343777.1 → NP_001330606.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UD15, A0A1P8BBC5

    8. NM_001343779.1 → NP_001330605.1  Serine carboxypeptidase S28 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UB63, A0A1P8BBB4
    Nucleotide Protein
    Heading Accession and Version

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