U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RUG2 Regulator of chromosome condensation (RCC1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834886, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RUG2
    Official Full Name
    Regulator of chromosome condensation (RCC1) family protein
    Primary source
    TAIR:AT5G48330
    Locus tag
    AT5G48330
    See related
    Araport:AT5G48330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K23F3.5; K23F3_5; RCC1/UVR8/GEF-like 2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RUG2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (19585924..19587857)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene portal protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001085266.2
    NM_124208.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Regulator of chromosome condensation (RCC1) family protein
    NP_001078735.1
    • Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 20346 Blast hits to 5903 proteins in 456 species: Archae - 102; Bacteria - 2678; Metazoa - 6920; Fungi - 1068; Plants - 2784; Viruses - 2; Other Eukaryotes - 6792 (source: NCBI BLink).
    NP_199644.2
    • Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 20331 Blast hits to 5924 proteins in 464 species: Archae - 100; Bacteria - 2715; Metazoa - 6825; Fungi - 1055; Plants - 2791; Viruses - 2; Other Eukaryotes - 6843 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19585924..19587857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001085266.2 → NP_001078735.1  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078735.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YC15, Q9LK81
      Conserved Domains (1) summary
      COG5184
      Location:36 → 431
      ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

    2. NM_124208.2 → NP_199644.2  Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199644.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YC15, A0A654G938, Q8GYL6
      Conserved Domains (1) summary
      COG5184
      Location:36 → 432
      ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.