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    Mitochondrial transcription termination factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836619, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mitochondrial transcription termination factor family protein
    Primary source
    TAIR:AT5G64950
    Locus tag
    AT5G64950
    See related
    Araport:AT5G64950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXK3.18; MXK3_18
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (25953844..25955202)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CPR5 protein Neighboring gene ABC2 homolog 13 Neighboring gene cyclin dependent kinase group C2 Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Control of organelle gene expression by the mitochondrial transcription termination factor mTERF22 in Arabidopsis thaliana plants. Shevtsov S, et al. PLoS One, 2018. PMID 30059532, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_125894.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial RNA metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mitochondrial RNA processing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mitochondrial transcription termination factor family protein
    NP_201300.1
    • Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25953844..25955202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125894.2 → NP_201300.1  Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201300.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKX3, A0A5S9YH27, Q9LV83
      Conserved Domains (1) summary
      cl19765
      Location:42 → 326
      mTERF; mTERF
    Nucleotide Protein
    Heading Accession and Version

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