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    SECE1 secE/sec61-gamma protein transport protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827144, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SECE1
    Official Full Name
    secE/sec61-gamma protein transport protein
    Primary source
    TAIR:AT4G14870
    Locus tag
    AT4G14870
    See related
    Araport:AT4G14870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3475W; FCAALL.408
    Summary
    Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.
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    Genomic context

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    See SECE1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (8517100..8517954)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene spindle assembly abnormal protein Neighboring gene 17.6 kDa class II heat shock protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ovate family protein 11 Neighboring gene O-acetylserine (thiol) lyase (OAS-TL) isoform A1 Neighboring gene FRIGIDA-like protein Neighboring gene 2Fe-2S ferredoxin-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chloroplast SecY is complexed to SecE and involved in the translocation of the 33-kDa but not the 23-kDa subunit of the oxygen-evolving complex. Schuenemann D, et al. J Biol Chem, 1999 Apr 23. PMID 10207046
    2. Plastids contain a second sec translocase system with essential functions. Skalitzky CA, et al. Plant Physiol, 2011 Jan. PMID 21051552, Free PMC Article
    3. The yeast split-ubiquitin system to study chloroplast membrane protein interactions. Pasch JC, et al. Appl Microbiol Biotechnol, 2005 Dec. PMID 15988575
    4. In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Friso G, et al. Plant Cell, 2004 Feb. PMID 14729914, Free PMC Article
    5. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117573.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein targeting IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within thylakoid membrane organization ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid membrane HDA PubMed 

    General protein information

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    Preferred Names
    secE/sec61-gamma protein transport protein
    NP_567446.1
    • secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein secretion, protein targeting; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein secE/sec61-gamma protein (InterPro:IPR001901), SecE subunit of protein translocation complex (InterPro:IPR005807); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8517100..8517954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117573.2 → NP_567446.1  secE/sec61-gamma protein transport protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567446.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23342
      UniProtKB/TrEMBL
      A0A178UZ24, A0A5S9XSF8, A0A654FPE7
      Conserved Domains (2) summary
      pfam05262
      Location:45 → 135
      Borrelia_P83; Borrelia P83/100 protein
      PRK07597
      Location:110 → 162
      secE; preprotein translocase subunit SecE; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23342.1

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