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    LOC100996437 uncharacterized LOC100996437 [ Homo sapiens (human) ]

    Gene ID: 100996437, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100996437
    Gene description
    uncharacterized LOC100996437
    See related
    Ensembl:ENSG00000226824
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 2.4), fat (RPKM 0.8) and 24 other tissues See more
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    Genomic context

    See LOC100996437 in Genome Data Viewer
    Location:
    7q11.21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (66654519..66669602)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (67874183..67889266)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (66119506..66134589)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ribosomal protein L35 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26084 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26085 Neighboring gene potassium channel tetramerization domain containing 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:66118787-66119392 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66119393-66119998 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66119999-66120604 Neighboring gene MPRA-validated peak6548 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66131083-66131823 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66131824-66132563 Neighboring gene RAB guanine nucleotide exchange factor 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:66146939-66147678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66157983-66158483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66161889-66162390 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:66192681-66193181 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26086 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66205397-66206063 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26087 Neighboring gene uncharacterized LOC107986707 Neighboring gene GrpE like 1, mitochondrial pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110037.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI937214, BF512337, BM826587, HY006622
      Related
      ENST00000656515.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      66654519..66669602
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      67874183..67889266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)