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    SH3 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815305, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SH3 domain-containing protein
    Primary source
    TAIR:AT2G07360
    Locus tag
    AT2G07360
    See related
    Araport:AT2G07360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13E11.13; T13E11_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    27
    Sequence:
    Chromosome: 2; NC_003071.7 (3047252..3057214, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene PREFOLDIN 1 Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. Gadeyne A, et al. Cell, 2014 Feb 13. PMID 24529374
    2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
    4. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001202586.1
    NM_126705.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    SH3 domain-containing protein
    NP_001189515.1
    • SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024).
    NP_178746.2
    • SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      3047252..3057214 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202586.1 → NP_001189515.1  SH3 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189515.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VS05, F4IL68
      Conserved Domains (1) summary
      cl17036
      Location:1143 → 1195
      SH3; Src Homology 3 domain superfamily

    2. NM_126705.5 → NP_178746.2  SH3 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178746.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VS05, Q84R15
      Conserved Domains (1) summary
      cl17036
      Location:1141 → 1193
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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