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    Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818462, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant calmodulin-binding protein-like protein
    Primary source
    TAIR:AT2G38800
    Locus tag
    AT2G38800
    See related
    Araport:AT2G38800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13I13.3; F13I13_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (16216752..16219159)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene cytochrome C oxidase subunit Neighboring gene uncharacterized protein Neighboring gene histone H2A 8 Neighboring gene DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129437.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plant calmodulin-binding protein-like protein
    NP_181414.1
    • Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT3G54570.1); Has 4321 Blast hits to 2381 proteins in 392 species: Archae - 26; Bacteria - 2334; Metazoa - 540; Fungi - 255; Plants - 198; Viruses - 28; Other Eukaryotes - 940 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16216752..16219159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129437.2 → NP_181414.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181414.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNF4, A0A5S9X5D1, A0A654F1F0, Q9SII1
      Conserved Domains (2) summary
      smart01054
      Location:483 → 593
      CaM_binding; Plant calmodulin-binding domain
      NF033845
      Location:255 → 501
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
    Nucleotide Protein
    Heading Accession and Version

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