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    APRL4 APR-like 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840382, updated on 18-Sep-2024

    Summary

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    Official Symbol
    APRL4
    Official Full Name
    APR-like 4
    Primary source
    TAIR:AT1G34780
    Locus tag
    AT1G34780
    See related
    Araport:AT1G34780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    APR-like 4; ATAPRL4; F11O6.7; F11O6_7
    Summary
    Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
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    Genomic context

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    See APRL4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (12748571..12750506, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2C family protein Neighboring gene general regulatory factor 11 Neighboring gene melanoma-associated antigen G1-like protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001123940.1
    NM_103198.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    APR-like 4
    NP_001117412.1
    • APR-like 4 (APRL4); LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_564452.1
    • APR-like 4 (APRL4); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 1005 Blast hits to 976 proteins in 184 species: Archae - 0; Bacteria - 10; Metazoa - 475; Fungi - 115; Plants - 289; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12748571..12750506 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103198.3 → NP_564452.1  APR-like 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564452.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H6M4, Q9SA00
      UniProtKB/TrEMBL
      A0A654EGY0
      Conserved Domains (1) summary
      cd02999
      Location:64 → 163
      PDI_a_ERp44_like; PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; ...

    2. NM_001123940.1 → NP_001117412.1  APR-like 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117412.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EGY0, A0A7G2E192
      Conserved Domains (1) summary
      cl00388
      Location:64 → 134
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SA00.1

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