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    GPAT5 glycerol-3-phosphate acyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820316, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GPAT5
    Official Full Name
    glycerol-3-phosphate acyltransferase 5
    Primary source
    TAIR:AT3G11430
    Locus tag
    AT3G11430
    See related
    Araport:AT3G11430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGPAT5; glycerol-3-phosphate acyltransferase 5; GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5; GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5
    Summary
    sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester.
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    Genomic context

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    See GPAT5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (3595694..3597952)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene myb domain protein 65 Neighboring gene DnaJ and Myb-like DNA-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Monoacylglycerols are components of root waxes and can be produced in the aerial cuticle by ectopic expression of a suberin-associated acyltransferase. Li Y, et al. Plant Physiol, 2007 Jul. PMID 17496107, Free PMC Article
    2. The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis. Beisson F, et al. Plant Cell, 2007 Jan. PMID 17259262, Free PMC Article
    3. New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses. Bafoil M, et al. Sci Rep, 2019 Jun 17. PMID 31209339, Free PMC Article
    4. A land-plant-specific glycerol-3-phosphate acyltransferase family in Arabidopsis: substrate specificity, sn-2 preference, and evolution. Yang W, et al. Plant Physiol, 2012 Oct. PMID 22864585, Free PMC Article
    5. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses.
      Title: New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses.
    2. GPAT5 expression correlated with production of both alpha- and beta-isomers of monoacylglycerols with C22 and C24 saturated acyl groups and the corresponding free fatty acids
      Title: Monoacylglycerols are components of root waxes and can be produced in the aerial cuticle by ectopic expression of a suberin-associated acyltransferase.
    3. GPAT5 has a critical role in polyester biogenesis in seed coats and roots.
      Title: The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111976.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycerol-3-phosphate 2-O-acyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables organic anion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within suberin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerol-3-phosphate acyltransferase 5
    NP_187750.1
    • glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3595694..3597952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111976.4 → NP_187750.1  glycerol-3-phosphate acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187750.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CAY3
      UniProtKB/TrEMBL
      A0A178VCP1, A0A5S9XBD0
      Conserved Domains (1) summary
      PLN02499
      Location:3 → 502
      PLN02499; glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAY3.1

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