CSLD3 cellulose synthase-like D3 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: CSLD3
Official Full Name: cellulose synthase-like D3
Primary source: TAIR:AT3G03050
Locus tag: AT3G03050
See related: Araport:AT3G03050
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATCSLD3; CELLULOSE SYNTHASE LIKE D3; cellulose synthase-like D3; KJK; KOJAK; RHD7; ROOT HAIR DEFECTIVE 7; T17B22.26; T17B22_26
Summary: encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.
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Genomic context

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See CSLD3 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 4

Sequence:: Chromosome: 3; NC_003074.8 (686981..691911)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Biochemical and Genetic Analysis Identify CSLD3 as a beta-1,4-Glucan Synthase That Functions during Plant Cell Wall Synthesis.
Title: Biochemical and Genetic Analysis Identify CSLD3 as a beta-1,4-Glucan Synthase That Functions during Plant Cell Wall Synthesis.
CSLD3 overexpression enhanced root and hypocotyl growth by increasing cell elongation, and the root growth was highly sensitive to ethylene treatment (1 microM ACC), in particular under phosphate starvation.
Title: AtCSLD3 and GhCSLD3 mediate root growth and cell elongation downstream of the ethylene response pathway in Arabidopsis.
the cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development
Title: The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development.
CSLD3 represents a distinct (1-->4)-beta-glucan synthase activity in apical plasma membranes during tip growth in root-hair cells.
Title: A role for CSLD3 during cell-wall synthesis in apical plasma membranes of tip-growing root-hair cells.

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_111175.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables cellulose synthase (UDP-forming) activity	IEA Inferred from Electronic Annotation more info
enables cellulose synthase activity	ISS Inferred from Sequence or Structural Similarity more info
enables glycosyltransferase activity	ISS Inferred from Sequence or Structural Similarity more info
enables mannan synthase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in cellulose biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within response to cold	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi apparatus	HDA more info	PubMed
located_in Golgi apparatus	ISM Inferred from Sequence Model more info
located_in endoplasmic reticulum	IDA Inferred from Direct Assay more info	PubMed
located_in endosome	HDA more info	PubMed
located_in plasma membrane	HDA more info	PubMed
located_in trans-Golgi network	HDA more info	PubMed

General protein information

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Preferred Names: cellulose synthase-like D3

NP_186955.1

cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

686981..691911

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_111175.3 → NP_186955.1 cellulose synthase-like D3 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_186955.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9M9M4

UniProtKB/TrEMBL

A0A178VEH0, A0A384LKM5, W8Q6V3

Conserved Domains (1) summary

PLN02248
Location:2 → 1145

PLN02248; cellulose synthase-like protein