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    SRO2 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838965, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SRO2
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G23550
    Locus tag
    AT1G23550
    See related
    Araport:AT1G23550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28C11.18; similar to RCD one 2
    Summary
    Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.
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    Genomic context

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    See SRO2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (8350728..8352791)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein Neighboring gene OBP32pep, putative (DUF220) Neighboring gene hypothetical protein (DUF220) Neighboring gene transmembrane protein, putative (Domain of unknown function DUF220)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_102204.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_173769.1
    • similar to RCD one 2 (SRO2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 3 (TAIR:AT1G70440.1); Has 178 Blast hits to 169 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8350728..8352791
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102204.3 → NP_173769.1  uncharacterized protein AT1G23550 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173769.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LQC4, Q9ZUD9
      UniProtKB/TrEMBL
      A0A5S9VQS0, A0A654EEB6
      Conserved Domains (1) summary
      pfam12174
      Location:251 → 317
      RST; RCD1-SRO-TAF4 (RST) plant domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUD9.1

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