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    transport/golgi organization-like protein (DUF833) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838656, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transport/golgi organization-like protein (DUF833)
    Primary source
    TAIR:AT1G20680
    Locus tag
    AT1G20680
    See related
    Araport:AT1G20680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2D10.17; F2D10_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (7169309..7170856)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene DNA-binding bromodomain-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001332455.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    transport/golgi organization-like protein (DUF833)
    NP_001185046.1
    • Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20730.1).
    NP_001319053.1
    • Protein of unknown function (DUF833); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20740.1); Has 128 Blast hits to 124 proteins in 28 species: Archae - 0; Bacteria - 24; Metazoa - 2; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7169309..7170856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198117.2 → NP_001185046.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185046.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DUV7, F4HUM3
      Conserved Domains (1) summary
      pfam05742
      Location:1 → 249
      TANGO2; Transport and Golgi organization 2

    2. NM_001332455.1 → NP_001319053.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VBS7, F4HUM4
    Nucleotide Protein
    Heading Accession and Version

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