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    Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827653, updated on 18-Sep-2024

    Summary

    Official Full Name
    Ankyrin repeat family protein
    Primary source
    TAIR:AT4G19150
    Locus tag
    AT4G19150
    See related
    Araport:AT4G19150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18B16.120; T18B16_120
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (10471331..10472742, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Replication factor-A protein 1-like protein Neighboring gene exopolysaccharide production negative regulator Neighboring gene ncRNA Neighboring gene transglutaminase family protein Neighboring gene nine-cis-epoxycarotenoid dioxygenase 4

    General gene information

    NM_001125540.1
    NM_118034.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 

    General protein information

    Preferred Names
    Ankyrin repeat family protein
    NP_001119012.1
    • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_193650.2
    • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G03430.1); Has 81213 Blast hits to 28344 proteins in 1181 species: Archae - 93; Bacteria - 6443; Metazoa - 41453; Fungi - 7183; Plants - 4369; Viruses - 872; Other Eukaryotes - 20800 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10471331..10472742 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118034.3NP_193650.2  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193650.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FQX6, Q8GX17
      Conserved Domains (4) summary
      cd00204
      Location:44156
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:54145
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:2069
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:4980
      ANK; ANK repeat [structural motif]
    2. NM_001125540.1NP_001119012.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119012.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYG5, F4JSG6
      Conserved Domains (3) summary
      cd00204
      Location:31133
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:31122
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:3157
      ANK; ANK repeat [structural motif]