U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CRK23 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828430, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CRK23
    Official Full Name
    cysteine-rich RLK (RECEPTOR-like protein kinase) 23
    Primary source
    TAIR:AT4G23310
    Locus tag
    AT4G23310
    See related
    Araport:AT4G23310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cysteine-rich RLK (RECEPTOR-like protein kinase) 23; F21P8.200; F21P8_200
    Summary
    Encodes a cysteine-rich receptor-like protein kinase.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CRK23 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (12185369..12188961)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 21 Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 22 Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 24 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Du L, et al. Plant J, 2000 Dec. PMID 11135117
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cysteine-rich RLK (RECEPTOR-like protein kinase) 23
    NP_194062.1
    • cysteine-rich RLK (RECEPTOR-like protein kinase) 23 (CRK23); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 121765 Blast hits to 118949 proteins in 4447 species: Archae - 102; Bacteria - 13740; Metazoa - 44280; Fungi - 10260; Plants - 35406; Viruses - 410; Other Eukaryotes - 17567 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12185369..12188961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118460.2 → NP_194062.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 23 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194062.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65482, Q7FKK0
      UniProtKB/TrEMBL
      A0A5S9XV28
      Conserved Domains (3) summary
      smart00219
      Location:511 → 780
      TyrKc; Tyrosine kinase, catalytic domain
      cd14066
      Location:514 → 781
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam01657
      Location:145 → 240
      Stress-antifung; Salt stress response/antifungal

    2. NM_001341598.1 → NP_001329016.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 23 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6F3, A0A5S9XV28
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65482.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.