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    4/1 protein short form protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828708, updated on 18-Sep-2024

    Summary

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    Official Full Name
    4/1 protein short form protein
    Primary source
    TAIR:AT4G26020
    Locus tag
    AT4G26020
    See related
    Araport:AT4G26020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20B18.130; F20B18_130
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (13200861..13204057, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene peroxidase superfamily protein Neighboring gene CCT motif family protein Neighboring gene RNA-binding KH domain-containing protein Neighboring gene Peroxidase superfamily protein Neighboring gene C2H2-like zinc finger protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. At-4/1, an interactor of the Tomato spotted wilt virus movement protein, belongs to a new family of plant proteins capable of directed intra- and intercellular trafficking. Paape M, et al. Mol Plant Microbe Interact, 2006 Aug. PMID 16903353
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118735.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intercellular transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in intracellular transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in intracellular anatomical structure IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    4/1 protein short form protein
    NP_001190843.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage.
    NP_194332.2
    • unknown protein; Has 17652 Blast hits to 12460 proteins in 982 species: Archae - 248; Bacteria - 2077; Metazoa - 7446; Fungi - 1455; Plants - 656; Viruses - 34; Other Eukaryotes - 5736 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13200861..13204057 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341773.1 → NP_001329294.1  4/1 protein short form protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MF98, Q1PE49, Q84UC5, Q9SZH6
      UniProtKB/TrEMBL
      A0A5S9XW11, A0A654FSU1, A0A7G2F5K3
      Conserved Domains (1) summary
      COG1196
      Location:47 → 246
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001203914.2 → NP_001190843.1  4/1 protein short form protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190843.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JU48
      Conserved Domains (1) summary
      pfam01576
      Location:40 → 203
      Myosin_tail_1; Myosin tail

    3. NM_118735.3 → NP_194332.2  4/1 protein short form protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194332.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MF98, Q1PE49, Q84UC5, Q9SZH6
      UniProtKB/TrEMBL
      A0A5S9XW11, A0A654FSU1, A0A7G2F5K3
      Conserved Domains (1) summary
      COG1196
      Location:47 → 246
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1PE49.1

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