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    XERO1 dehydrin xero 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824262, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XERO1
    Official Full Name
    dehydrin xero 1
    Primary source
    TAIR:AT3G50980
    Locus tag
    AT3G50980
    See related
    Araport:AT3G50980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    dehydrin xero 1
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    Genomic context

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    See XERO1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (18941925..18942940)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene HOPZ-ACTIVATED RESISTANCE 1 Neighboring gene thioredoxin domain PLP3A-like protein Neighboring gene dehydrin family protein Neighboring gene Peroxidase superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_114958.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    dehydrin xero 1
    NP_190667.2
    • dehydrin xero 1 (XERO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, inflorescence meristem, petal, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT5G66400.1); Has 1530 Blast hits to 1085 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1529; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18941925..18942940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114958.4 → NP_190667.2  dehydrin xero 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190667.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P25863, Q0WP39, Q9SD47
      UniProtKB/TrEMBL
      A0A178VG83, A0A5S9XJW9
      Conserved Domains (1) summary
      pfam00257
      Location:26 → 127
      Dehydrin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P25863.2

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