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    QQT1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832298, updated on 18-Sep-2024

    Summary

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    Official Symbol
    QQT1
    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT5G22370
    Locus tag
    AT5G22370
    See related
    Araport:AT5G22370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMB1705; EMBRYO DEFECTIVE 1705; MWD9.17; MWD9_17; QUATRE-QUART 1
    Summary
    Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800).
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    Genomic context

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    See QQT1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (7406030..7408754)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene vesicle-associated membrane protein 714 Neighboring gene NAC domain containing protein 90 Neighboring gene FANTASTIC four-like protein (DUF3049)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. quatre-quart1 is an indispensable U12 intron-containing gene that plays a crucial role in Arabidopsis development. Kwak KJ, et al. J Exp Bot, 2017 May 17. PMID 28475733, Free PMC Article
    2. QQT proteins colocalize with microtubules and are essential for early embryo development in Arabidopsis. Lahmy S, et al. Plant J, 2007 May. PMID 17419841
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. evidence that QQT1 is an indispensable U12 intron-containing gene that is crucial for the normal development of A. thaliana
      Title: quatre-quart1 is an indispensable U12 intron-containing gene that plays a crucial role in Arabidopsis development.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125789.1
    NM_001343725.1
    NM_122142.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within developmental process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within shoot apical meristem development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001119261.1
    • QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_197629.2
    • QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 1460 Blast hits to 1459 proteins in 284 species: Archae - 123; Bacteria - 7; Metazoa - 415; Fungi - 414; Plants - 155; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7406030..7408754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122142.4 → NP_197629.2  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197629.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56XY2, Q9FMR4
      UniProtKB/TrEMBL
      A0A178UBM9, A0A5S9Y685, A0A654G3C4
      Conserved Domains (1) summary
      cd17871
      Location:3 → 252
      GPN2; GPN-loop GTPase 2

    2. NM_001125789.1 → NP_001119261.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119261.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56XY2, Q9FMR4
      UniProtKB/TrEMBL
      A0A178UBM9, A0A5S9Y685, A0A654G3C4
      Conserved Domains (1) summary
      cd17871
      Location:3 → 252
      GPN2; GPN-loop GTPase 2

    3. NM_001343725.1 → NP_001332350.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56XY2, Q9FMR4
      UniProtKB/TrEMBL
      A0A178UBM9, A0A5S9Y685, A0A654G3C4
      Conserved Domains (1) summary
      cd17871
      Location:3 → 252
      GPN2; GPN-loop GTPase 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q56XY2.1

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