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    SIN-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835014, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SIN-like family protein
    Primary source
    TAIR:AT5G49530
    Locus tag
    AT5G49530
    See related
    Araport:AT5G49530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K6M13.8; K6M13_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (20100545..20104605)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Rab5-interacting family protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene biogenesis of lysosome organelles complex 1 subunit-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124330.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SIN-like family protein
    NP_199764.1
    • SIN-like family protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20100545..20104605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124330.4 → NP_199764.1  SIN-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199764.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UG18, A0A5S9YCS8, Q9FGZ3
      Conserved Domains (1) summary
      pfam04801
      Location:115 → 484
      Sin_N; Sin-like protein conserved region
    Nucleotide Protein
    Heading Accession and Version

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