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    Ribosomal protein L11 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835235, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L11 family protein
    Primary source
    TAIR:AT5G51610
    Locus tag
    AT5G51610
    See related
    Araport:AT5G51610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K17N15.16; K17N15_16
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (20965577..20966805)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AT hook motif DNA-binding family protein Neighboring gene Microtubule associated protein (MAP65/ASE1) family protein Neighboring gene Uncharacterized protein family (UPF0172) Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene trichome birefringence-like protein (DUF828)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein L11 family protein
    NP_199974.1
    • Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 8145 Blast hits to 8145 proteins in 2775 species: Archae - 291; Bacteria - 5426; Metazoa - 99; Fungi - 120; Plants - 103; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20965577..20966805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124540.1 → NP_199974.1  Ribosomal protein L11 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199974.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAU2, Q9FHM3
      Conserved Domains (1) summary
      cl29338
      Location:71 → 168
      Ribosomal_L11; Ribosomal protein L11. Ribosomal protein L11, together with proteins L10 and L7/L12, and 23S rRNA, form the L7/L12 stalk on the surface of the large subunit of the ribosome. The homologous eukaryotic cytoplasmic protein is also called 60S ribosomal ...
    Nucleotide Protein
    Heading Accession and Version

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