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    MAP65-9 microtubule-associated protein 65-9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836346, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MAP65-9
    Official Full Name
    microtubule-associated protein 65-9
    Primary source
    TAIR:AT5G62250
    Locus tag
    AT5G62250
    See related
    Araport:AT5G62250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    microtubule-associated protein 65-9; MMI9.8; MMI9_8
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    Genomic context

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    See MAP65-9 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (25005434..25008361)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ERECTA-like 1 Neighboring gene Cell cycle regulated microtubule associated protein Neighboring gene AT hook motif DNA-binding family protein Neighboring gene ribosomal protein L20

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The C-terminal variable region specifies the dynamic properties of Arabidopsis microtubule-associated protein MAP65 isotypes. Smertenko AP, et al. Plant Cell, 2008 Dec. PMID 19060108, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    NOT located_in microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    microtubule-associated protein 65-9
    NP_001318863.1
    • microtubule-associated protein 65-9 (MAP65-9); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: Microtubule associated protein (MAP65/ASE1) family protein (TAIR:AT5G51600.1); Has 14792 Blast hits to 10558 proteins in 786 species: Archae - 349; Bacteria - 1217; Metazoa - 7703; Fungi - 921; Plants - 837; Viruses - 44; Other Eukaryotes - 3721 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25005434..25008361
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345543.1 → NP_001318863.1  microtubule-associated protein 65-9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4PSA3, Q9LVB1
      UniProtKB/TrEMBL
      A0A178UEH6, A0A5S9YGC1
      Conserved Domains (1) summary
      pfam03999
      Location:50 → 547
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

    2. NM_125619.2 → NP_201031.1  microtubule-associated protein 65-9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201031.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4PSA3, Q9LVB1
      UniProtKB/TrEMBL
      A0A178UEH6, A0A5S9YGC1
      Conserved Domains (1) summary
      pfam03999
      Location:50 → 547
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q4PSA3.1

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