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    HOS3-1 GNS1/SUR4 membrane protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829836, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HOS3-1
    Official Full Name
    GNS1/SUR4 membrane protein family
    Primary source
    TAIR:AT4G36830
    Locus tag
    AT4G36830
    See related
    Araport:AT4G36830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.81; AP22_81
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    Genomic context

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    See HOS3-1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (17349218..17351163)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene geranylgeranyl pyrophosphate synthase 1 Neighboring gene calcium uniporter (DUF607) Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene PQ-loop repeat family protein / transmembrane family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. HOS3, an ELO-like gene, inhibits effects of ABA and implicates a S-1-P/ceramide control system for abiotic stress responses in Arabidopsis thaliana. Quist TM, et al. Mol Plant, 2009 Jan. PMID 19529829, Free PMC Article
    2. Arabidopsis Bax inhibitor-1 interacts with enzymes related to very-long-chain fatty acid synthesis. Nagano M, et al. J Plant Res, 2019 Jan. PMID 30604175
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data establishes that HOS3 inhibits ABA-mediated stress responses and implicate the VLCFA pathway and products as control points for several aspects of abiotic stress signaling and responses. [HOS3]
      Title: HOS3, an ELO-like gene, inhibits effects of ABA and implicates a S-1-P/ceramide control system for abiotic stress responses in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119847.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fatty acid elongase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to abscisic acid stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in fatty acid elongation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    colocalizes_with endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GNS1/SUR4 membrane protein family
    NP_195401.1
    • HOS3-1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT1G75000.1); Has 156 Blast hits to 156 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 37; Plants - 71; Viruses - 2; Other Eukaryotes - 27 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17349218..17351163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342419.1 → NP_001329164.1  GNS1/SUR4 membrane protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UTZ3, A0A178UW40, A0A1P8B6V8, A0A384LBR2
      Conserved Domains (1) summary
      cl03120
      Location:30 → 251
      ELO; GNS1/SUR4 family

    2. NM_119847.4 → NP_195401.1  GNS1/SUR4 membrane protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195401.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYY4
      UniProtKB/TrEMBL
      A0A178UTZ3, A0A7G2FAI4
      Conserved Domains (1) summary
      pfam01151
      Location:30 → 279
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYY4.1

    Gene LinkOut

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