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    YUC7 YUCCA 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817885, updated on 18-Sep-2024

    Summary

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    Official Symbol
    YUC7
    Official Full Name
    YUCCA 7
    Primary source
    TAIR:AT2G33230
    Locus tag
    AT2G33230
    See related
    Araport:AT2G33230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25I18.3; F25I18_3; YUCCA 7
    Summary
    Encodes a flavin monooxygenase gene which belongs to the tryptophan-dependent auxin biosynthetic pathway and enhances drought resistance.
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    Genomic context

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    See YUC7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (14080319..14081971, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Serinc-domain containing serine and sphingolipid biosynthesis protein Neighboring gene heat shock protein 60-2 Neighboring gene GRIM-19 protein Neighboring gene low-molecular-weight cysteine-rich 49 Neighboring gene myosin XI D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activation of a flavin monooxygenase gene YUCCA7 enhances drought resistance in Arabidopsis. Lee M, et al. Planta, 2012 May. PMID 22109847
    2. Endogenous auxin maintains embryonic cell identity and promotes somatic embryo development in Arabidopsis. Karami O, et al. Plant J, 2023 Jan. PMID 36345646, Free PMC Article
    3. Activation-tagged suppressors of a weak brassinosteroid receptor mutant. Kang B, et al. Mol Plant, 2010 Jan. PMID 19995721, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables indole-3-pyruvate monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within indoleacetic acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within somatic embryogenesis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    YUCCA 7
    NP_180881.1
    • YUCCA 7 (YUC7); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 3 (TAIR:AT1G04610.1); Has 9342 Blast hits to 9320 proteins in 1117 species: Archae - 14; Bacteria - 4686; Metazoa - 781; Fungi - 1476; Plants - 662; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14080319..14081971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128882.2 → NP_180881.1  YUCCA 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180881.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49312
      UniProtKB/TrEMBL
      A0A178VZZ0
      Conserved Domains (2) summary
      COG2072
      Location:33 → 410
      CzcO; Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]
      pfam13738
      Location:33 → 232
      Pyr_redox_3; Pyridine nucleotide-disulphide oxidoreductase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49312.1

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