U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GSL03 glucan synthase-like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817755, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GSL03
    Official Full Name
    glucan synthase-like 3
    Primary source
    TAIR:AT2G31960
    Locus tag
    AT2G31960
    See related
    Araport:AT2G31960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGSL03; ATGSL3; F22D22.29; F22D22_29; glucan synthase-like 3
    Summary
    encodes a protein similar to callose synthase
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GSL03 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    43
    Sequence:
    Chromosome: 2; NC_003071.7 (13588522..13600430)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene low-molecular-weight cysteine-rich 76 Neighboring gene cofactor of nitrate reductase and xanthine dehydrogenase 2 Neighboring gene ncRNA Neighboring gene low-molecular-weight cysteine-rich 75 Neighboring gene DNA repair-recombination protein (RAD50) Neighboring gene uncharacterized protein Neighboring gene PHYTOCYSTATIN 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    NM_001336362.1
    NM_001336363.1
    NM_179847.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1,3-beta-D-glucan synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 1,3-beta-D-glucan synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in (1->3)-beta-D-glucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of 1,3-beta-D-glucan synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    glucan synthase-like 3
    NP_001318331.1
    • glucan synthase-like 3 (GSL03); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1).
    NP_850178.2
    • glucan synthase-like 3 (GSL03); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1376 Blast hits to 1046 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 693; Plants - 541; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13588522..13600430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202724.2 → NP_001189653.1  glucan synthase-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189653.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    2. NM_001336361.1 → NP_001318331.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    3. NM_179847.3 → NP_850178.2  glucan synthase-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850178.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    4. NM_001336362.1 → NP_001323730.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXZ6, A0A654F340

    5. NM_001336363.1 → NP_001323731.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SL03.3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.