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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841277, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G48560
    Locus tag
    AT1G48560
    See related
    Araport:AT1G48560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1N15.18; T1N15_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (17952854..17955509)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene proteasome inhibitor-like protein Neighboring gene Outer arm dynein light chain 1 protein Neighboring gene Vacuolar protein sorting-associated protein 26 Neighboring gene zinc finger (Ran-binding) family protein Neighboring gene nuclear localized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana MSI4/FVE associates with members of a novel family of plant specific PWWP/RRM domain proteins. Kenzior A, et al. Plant Mol Biol, 2015 Mar. PMID 25600937
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001198244.1
    NM_103752.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001185173.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages.
    NP_175289.2
    • unknown protein; Has 75 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17952854..17955509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103752.5 → NP_175289.2  uncharacterized protein AT1G48560 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175289.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ28, Q0WPR2, Q9LP68

    2. NM_001198244.1 → NP_001185173.1  uncharacterized protein AT1G48560 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185173.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ28, F4HYH8, Q0WPR2
    Nucleotide Protein
    Heading Accession and Version

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