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    Target of Myb protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838737, updated on 18-Sep-2024

    Summary

    Official Full Name
    Target of Myb protein 1
    Primary source
    TAIR:AT1G21380
    Locus tag
    AT1G21380
    See related
    Araport:AT1G21380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J8.3; F24J8_3
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (7485636..7488780, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Thioredoxin superfamily protein Neighboring gene glycolipid transfer protein 2 Neighboring gene uncharacterized protein Neighboring gene embryo defective 2170 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    General gene information

    NM_101990.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol binding  
    enables ubiquitin binding  
    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    Target of Myb protein 1
    NP_564138.1
    • Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7485636..7488780 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101990.4 → NP_564138.1  Target of Myb protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564138.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LPL6
      UniProtKB/TrEMBL
      A0A178WFT5, A0A5S9VG62, A0A7G2DV36
      Conserved Domains (2) summary
      cd03561
      Location:10 → 135
      VHS; VHS (Vps27/Hrs/STAM) domain family
      cd14231
      Location:188 → 265
      GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
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