U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    phosphatidylinositolglycan-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829705, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    phosphatidylinositolglycan-like protein
    Primary source
    TAIR:AT4G35530
    Locus tag
    AT4G35530
    See related
    Araport:AT4G35530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8D20.40; F8D20_40
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (16871734..16873722, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PHD finger-like protein Neighboring gene uncharacterized protein Neighboring gene MUTL protein homolog 3 Neighboring gene ncRNA Neighboring gene POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 Neighboring gene WUSCHEL related homeobox 13

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_119718.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    phosphatidylinositolglycan-like protein
    NP_195278.2
    • phosphatidylinositolglycan-related; CONTAINS InterPro DOMAIN/s: GPI-GlcNAc transferase complex, PIG-H component (InterPro:IPR019328); Has 106 Blast hits to 106 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16871734..16873722 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119718.6 → NP_195278.2  phosphatidylinositolglycan-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195278.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FVV8, O81786, Q8VY53
      Conserved Domains (1) summary
      pfam10181
      Location:94 → 157
      PIG-H; GPI-GlcNAc transferase complex, PIG-H component
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools