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    MYB64 myb domain protein 64 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830972, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB64
    Official Full Name
    myb domain protein 64
    Primary source
    TAIR:AT5G11050
    Locus tag
    AT5G11050
    See related
    Araport:AT5G11050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB64; myb domain protein 64; T5K6.40; T5K6_40; UAS-TAGGED ROOT PATTERNING10; URP10
    Summary
    Member of R2R3-MYB transcription factor gene family.
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    Genomic context

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    See MYB64 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (3502092..3503834)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene aberrant root formation protein Neighboring gene TRS120 Neighboring gene homeobox protein knotted-1-like 4 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MYB64 and MYB119 are required for cellularization and differentiation during female gametogenesis in Arabidopsis thaliana. Rabiger DS, et al. PLoS Genet, 2013. PMID 24068955, Free PMC Article
    2. A GAL4-based targeted activation tagging system in Arabidopsis thaliana. Waki T, et al. Plant J, 2013 Feb. PMID 23057675
    3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_121143.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 64
    NP_196666.1
    • myb domain protein 64 (MYB64); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: egg cell, female gametophyte; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 119 (TAIR:AT5G58850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3502092..3503834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121143.2 → NP_196666.1  myb domain protein 64 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196666.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94CG3, Q9FY60
      UniProtKB/TrEMBL
      A0A178USB3, A0A654G033
      Conserved Domains (1) summary
      PLN03091
      Location:105 → 209
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FY60.1

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