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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001253392.1 → NP_001240321.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 2
See identical proteins and their annotated locations for NP_001240321.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon which results in the use of a downstream start codon, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1. Variants 2 and 6 both encode the same isoform (2).
- Source sequence(s)
-
AK122454, AK147884, X69942
- UniProtKB/Swiss-Prot
-
Q04692
- Conserved Domains (2) summary
-
- PLN03142
Location:286 → 808
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:307 → 489
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
NM_001355248.2 → NP_001342177.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks several exons and includes an alternate 3' terminal exon, compared to variant 1. The encoded protein (isoform 3) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 3, 4, and 7 all encode the same protein (isoform 3).
- Source sequence(s)
-
AC138622
- Consensus CDS
-
CCDS90055.1
- UniProtKB/TrEMBL
- A0A0N4SUQ5, A0A0N4SVS7
- Related
- ENSMUSP00000144776.2, ENSMUST00000204696.3
-
NM_001355249.2 → NP_001342178.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks several exons and includes an alternate 3' terminal exon, compared to variant 1. The encoded protein (isoform 3) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 3, 4, and 7 all encode the same protein (isoform 3).
- Source sequence(s)
-
AC138622
- Consensus CDS
-
CCDS90055.1
- UniProtKB/TrEMBL
- A0A0N4SUQ5, A0A0N4SVS7
- Related
- ENSMUSP00000145340.2, ENSMUST00000205118.3
-
NM_001355250.2 → NP_001342179.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, compared to variant 1, and encodes isoform 1. Variants 1 and 5 encode the same protein (isoform 1).
- Source sequence(s)
-
AC138622, AC143330
- Consensus CDS
-
CCDS20204.1
- UniProtKB/Swiss-Prot
- Q04692, Q3UGK6, Q3UYR6
- Conserved Domains (2) summary
-
- PLN03142
Location:471 → 993
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:492 → 674
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
NM_001409790.1 → NP_001396719.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC138622, AC143330
-
NM_001409791.1 → NP_001396720.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC138622
- UniProtKB/TrEMBL
- A0A0N4SUQ5, A0A0N4SVS7
-
NM_007958.3 → NP_031984.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 1
See identical proteins and their annotated locations for NP_031984.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest protein (isoform 1). Variants 1 and 5 encode the same protein (isoform 1).
- Source sequence(s)
-
AC138622, AC143330
- Consensus CDS
-
CCDS20204.1
- UniProtKB/Swiss-Prot
- Q04692, Q3UGK6, Q3UYR6
- Related
- ENSMUSP00000031984.7, ENSMUST00000031984.9
- Conserved Domains (2) summary
-
- PLN03142
Location:471 → 993
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:492 → 674
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
65019577..65093045
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036165811.1 → XP_036021704.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X2
- Conserved Domains (2) summary
-
- PLN03142
Location:471 → 964
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:492 → 674
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
XM_036165812.1 → XP_036021705.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X2
- Conserved Domains (2) summary
-
- PLN03142
Location:471 → 964
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:492 → 674
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
XM_036165813.1 → XP_036021706.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X3
- Conserved Domains (2) summary
-
- PLN03142
Location:286 → 808
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:307 → 489
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
XM_006505510.4 → XP_006505573.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
See identical proteins and their annotated locations for XP_006505573.1
- UniProtKB/Swiss-Prot
- Q04692, Q3UGK6, Q3UYR6
- Conserved Domains (2) summary
-
- PLN03142
Location:471 → 993
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:492 → 674
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
XM_006505512.5 → XP_006505575.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X3
See identical proteins and their annotated locations for XP_006505575.1
- UniProtKB/Swiss-Prot
-
Q04692
- Conserved Domains (2) summary
-
- PLN03142
Location:286 → 808
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:307 → 489
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
-
XM_006505513.5 → XP_006505576.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X4
- Conserved Domains (2) summary
-
- PLN03142
Location:46 → 568
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd17998
Location:67 → 249
- DEXHc_SMARCAD1; DEXH-box helicase domain of SMARCAD1
RNA
-
XR_003956162.2 RNA Sequence
-
XR_003956163.2 RNA Sequence