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    CG12659 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50403, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12659provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040929
    Locus tag
    Dmel_CG12659
    See related
    AllianceGenome:FB:FBgn0040929
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12659
    Summary
    Predicted to be involved in chromatin remodeling. Predicted to be part of Ino80 complex. Is expressed in organism. Orthologous to human INO80C (INO80 complex subunit C). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12659 in Genome Data Viewer
    Location:
    7F7-7F7; 1-23 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8590775..8591729, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8484808..8485762, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein Neighboring gene Chromatin assembly factor 1, p180 subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Predictive features of gene expression variation reveal mechanistic link with differential expression. Sigalova OM, et al. Mol Syst Biol, 2020 Aug. PMID 32767663, Free PMC Article
    2. Organization of the sex-ratio meiotic drive region in Drosophila simulans. Montchamp-Moreau C, et al. Genetics, 2006 Nov. PMID 16387875, Free PMC Article
    3. The chromosomal high-affinity binding sites for the Drosophila dosage compensation complex. Straub T, et al. PLoS Genet, 2008 Dec. PMID 19079572, Free PMC Article
    4. Spatial expression of transcription factors in Drosophila embryonic organ development. Hammonds AS, et al. Genome Biol, 2013 Dec 20. PMID 24359758, Free PMC Article
    5. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12659-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8590775..8591729 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272415.1 → NP_001259344.1  uncharacterized protein Dmel_CG12659 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259344.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T0C5, Q9W3D4
      Conserved Domains (1) summary
      cl02154
      Location:11 → 105
      YL1_C; YL1 nuclear protein C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W3D4 Q9W3D4

    Gene LinkOut

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