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    CkIIalpha-i1 CKII-alpha subunit interactor-1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39721, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CkIIalpha-i1provided by FlyBase
    Official Full Name
    CKII-alpha subunit interactor-1provided by FlyBase
    Primary source
    FLYBASE:FBgn0015025
    Locus tag
    Dmel_CG6215
    See related
    AllianceGenome:FB:FBgn0015025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6215; CKIIalpha-I1; CKIIalpha-iI; dCKIIalpha-i1; DmA35; Dmel\CG6215; ZFP47
    Summary
    Enables protein kinase binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CkIIalpha-i1 in Genome Data Viewer
    Location:
    72A1-72A1; 3-43 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15816979..15818621)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15810079..15811721)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene flower Neighboring gene Decapping protein 2 Neighboring gene diablo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biallelic missense variants in ZBTB11 can cause intellectual disability in humans. Fattahi Z, et al. Hum Mol Genet, 2018 Sep 15. PMID 29893856
    2. A gene located at 72A in Drosophila melanogaster encodes a novel zinc-finger protein that interacts with protein kinase CK2. Kalive M, et al. Mol Cell Biochem, 2001 Nov. PMID 11827180
    3. Flower forms an extracellular code that reveals the fitness of a cell to its neighbors in Drosophila. Rhiner C, et al. Dev Cell, 2010 Jun 15. PMID 20627080
    4. Sox21b underlies the rapid diversification of a novel male genital structure between Drosophila species. Ridgway AM, et al. Curr Biol, 2024 Mar 11. PMID 38309269
    5. A genome-wide RNA interference screen reveals that variant histones are necessary for replication-dependent histone pre-mRNA processing. Wagner EJ, et al. Mol Cell, 2007 Nov 30. PMID 18042462

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ZFP47 is a new physiological partner and substrate of CK2.
      Title: A gene located at 72A in Drosophila melanogaster encodes a novel zinc-finger protein that interacts with protein kinase CK2.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein kinase binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CKII-alpha subunit interactor-1
    Names
    CG6215-PA
    CkIIalpha-i1-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15816979..15818621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079372.4 → NP_524096.2  CKII-alpha subunit interactor-1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524096.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q24161, Q9VUU3
      Related
      FBpp0075259
      Conserved Domains (1) summary
      sd00017
      Location:239 → 259
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q24161 Q24161
    Q9VUU3 Q9VUU3

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