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    LDL receptor wingless signaling/trafficking chaperone [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819208, updated on 18-Sep-2024

    Summary

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    Official Full Name
    LDL receptor wingless signaling/trafficking chaperone
    Primary source
    TAIR:AT2G46000
    Locus tag
    AT2G46000
    See related
    Araport:AT2G46000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I18.48
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (18921024..18922179, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene mesoderm induction early response protein Neighboring gene ribosomal RNA small subunit methyltransferase G Neighboring gene ncRNA Neighboring gene transcription regulatory protein SNF2 Neighboring gene ubiquitin-conjugating enzyme 6 Neighboring gene ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_130163.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    LDL receptor wingless signaling/trafficking chaperone
    NP_566061.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18921024..18922179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130163.3 → NP_566061.1  LDL receptor wingless signaling/trafficking chaperone [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566061.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSS3, O82812
    Nucleotide Protein
    Heading Accession and Version

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