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    Bestrophin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819195, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Bestrophin-like protein
    Primary source
    TAIR:AT2G45870
    Locus tag
    AT2G45870
    See related
    Araport:AT2G45870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I18.15
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (18875736..18877679)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene AT hook motif DNA-binding family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene beta-amylase 7 Neighboring gene RHO guanyl-nucleotide exchange factor 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A voltage-dependent chloride channel fine-tunes photosynthesis in plants. Herdean A, et al. Nat Commun, 2016 May 24. PMID 27216227, Free PMC Article
    2. A bestrophin-like protein modulates the proton motive force across the thylakoid membrane in Arabidopsis. Duan Z, et al. J Integr Plant Biol, 2016 Oct. PMID 26947269, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    NM_130150.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables voltage-gated chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of photosynthesis, light reaction IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of photosynthesis, light reaction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast stromal thylakoid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bestrophin-like protein
    NP_182111.1
    • Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT3G61320.1); Has 1419 Blast hits to 1415 proteins in 515 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 123; Plants - 115; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18875736..18877679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337156.1 → NP_001323656.1  Bestrophin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXN9

    2. NM_001337157.1 → NP_001323655.1  Bestrophin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXP7, A0A654F3M4

    3. NM_130150.3 → NP_182111.1  Bestrophin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182111.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80832
      UniProtKB/TrEMBL
      A0A5S9X7B4, A0A654F3M4
      Conserved Domains (1) summary
      pfam01062
      Location:93 → 370
      Bestrophin; RFP-TM, chloride channel
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80832.1

    Gene LinkOut

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