U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GLP7 germin-like protein 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837586, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    GLP7
    Official Full Name
    germin-like protein 7
    Primary source
    TAIR:AT1G10460
    Locus tag
    AT1G10460
    See related
    Araport:AT1G10460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    germin-like protein 7; T10O24.6
    Summary
    germin-like protein (GLP7)
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GLP7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (3439030..3440359, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene paired amphipathic helix Sin3-like protein Neighboring gene B3 DNA-binding domain protein Neighboring gene response regulator 4 Neighboring gene zinc finger protein 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_100920.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    germin-like protein 7
    NP_563870.2
    • germin-like protein 7 (GLP7); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT3G05950.1); Has 1505 Blast hits to 1501 proteins in 101 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 42; Plants - 1425; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3439030..3440359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100920.4 → NP_563870.2  germin-like protein 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563870.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P92998, Q9S7Q1
      UniProtKB/TrEMBL
      A0A178WAY9, A0A384KJ98, A0A5S9TQ28, A0A654E8G3, A0JQ79
      Conserved Domains (1) summary
      cd02241
      Location:19 → 215
      cupin_OxOx; Oxalate oxidase (germin), cupin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P92998.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools