TAR1 tryptophan aminotransferase related 1 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: TAR1
Official Full Name: tryptophan aminotransferase related 1
Primary source: TAIR:AT1G23320
Locus tag: AT1G23320
See related: Araport:AT1G23320
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F26F24.17; F26F24_17; tryptophan aminotransferase related 1
Summary: Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. This gene appears to be expressed at a very low level during seedling development. Triple mutant analyses implicate this gene in embryonic development.
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Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

Function	Evidence Code	Pubs
enables L-tryptophan:2-oxoglutarate aminotransferase activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables L-tryptophan:pyruvate aminotransferase activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables carbon-sulfur lyase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in auxin biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cotyledon development	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within cotyledon vascular tissue pattern formation	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within embryo development ending in seed dormancy	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within primary root development	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within response to ethylene	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

NP_173746.1

tryptophan aminotransferase related 1 (TAR1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase of Arabidopsis 1 (TAIR:AT1G70560.1); Has 469 Blast hits to 469 proteins in 155 species: Archae - 22; Bacteria - 229; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).