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    serine/threonine-protein phosphatase 7 long form-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841230, updated on 18-Sep-2024

    Summary

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    Official Full Name
    serine/threonine-protein phosphatase 7 long form-like protein
    Primary source
    TAIR:AT1G48120
    Locus tag
    AT1G48120
    See related
    Araport:AT1G48120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21D18.16; F21D18_16; MAIL3; MAIN-LIKE 3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (17773627..17780106, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pectin lyase-like superfamily protein Neighboring gene ncRNA Neighboring gene evolutionarily conserved C-terminal region 7 Neighboring gene 1-cysteine peroxiredoxin 1 Neighboring gene dolichol-phosphate mannosyltransferase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103708.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 7 long form-like protein
    NP_175246.2
    • hydrolases;protein serine/threonine phosphatases; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: serine/threonine phosphatase 7 (TAIR:AT5G63870.1); Has 7651 Blast hits to 7316 proteins in 444 species: Archae - 82; Bacteria - 281; Metazoa - 2438; Fungi - 1339; Plants - 1824; Viruses - 2; Other Eukaryotes - 1685 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17773627..17780106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103708.4 → NP_175246.2  serine/threonine-protein phosphatase 7 long form-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175246.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LNG5
      UniProtKB/TrEMBL
      A0A178WKK5, A0A5S9WMW4
      Conserved Domains (2) summary
      cd07418
      Location:589 → 971
      MPP_PP7; PP7, metallophosphatase domain
      pfam10536
      Location:68 → 435
      PMD; Plant mobile domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LNG5.1

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