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    RLP16 receptor like protein 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843760, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP16
    Official Full Name
    receptor like protein 16
    Primary source
    TAIR:AT1G74200
    Locus tag
    AT1G74200
    See related
    Araport:AT1G74200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP16; F1O17.13; F1O17_13; receptor like protein 16
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    Genomic context

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    See RLP16 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (27906909..27909358, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene receptor like protein 14 Neighboring gene ncRNA Neighboring gene receptor like protein 15 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PLC-like phosphodiesterases superfamily protein Neighboring gene homeobox-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334636.1
    NM_001334637.1
    NM_106080.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 16
    NP_177560.2
    • receptor like protein 16 (RLP16); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1); Has 78773 Blast hits to 22315 proteins in 841 species: Archae - 22; Bacteria - 2210; Metazoa - 13539; Fungi - 553; Plants - 58397; Viruses - 0; Other Eukaryotes - 4052 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27906909..27909358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106080.2 → NP_177560.2  receptor like protein 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177560.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HTV6, Q9C906
      Conserved Domains (2) summary
      sd00033
      Location:25 → 46
      LRR_RI; leucine-rich repeat [structural motif]
      cl26793
      Location:12 → 255
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    2. NM_001334636.1 → NP_001321481.1  receptor like protein 16 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HTV6, Q9C906
      Conserved Domains (2) summary
      sd00033
      Location:25 → 46
      LRR_RI; leucine-rich repeat [structural motif]
      cl26793
      Location:12 → 255
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    3. NM_001334637.1 → NP_001321482.1  receptor like protein 16 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HTV6, Q9C906
      Conserved Domains (2) summary
      sd00033
      Location:25 → 46
      LRR_RI; leucine-rich repeat [structural motif]
      cl26793
      Location:12 → 255
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HTV6.1

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