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    SYP131 syntaxin of plants 131 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821141, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SYP131
    Official Full Name
    syntaxin of plants 131
    Primary source
    TAIR:AT3G03800
    Locus tag
    AT3G03800
    See related
    Araport:AT3G03800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSYP131; F20H23.28; F20H23_28; syntaxin of plants 131
    Summary
    member of SYP13 Gene Family
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    Genomic context

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    See SYP131 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (969050..971691)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene methionine synthase 2 Neighboring gene ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein Neighboring gene O-fucosyltransferase family protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VAMP726 and VAMP725 regulate vesicle secretion and pollen tube growth in Arabidopsis. Liu X, et al. Plant Cell Rep, 2023 Dec. PMID 37805949
    2. Evolutionarily diverse SYP1 Qa-SNAREs jointly sustain pollen tube growth in Arabidopsis. Slane D, et al. Plant J, 2017 Nov. PMID 28792633
    3. The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. Sanderfoot AA, et al. Plant Physiol, 2000 Dec. PMID 11115874, Free PMC Article
    4. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001337487.1
    NM_001337488.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables SNAP receptor activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables SNARE binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intracellular protein transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within membrane fusion TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in pollen tube tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin of plants 131
    NP_001319461.1
    • syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      969050..971691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337487.1 → NP_001319461.1  syntaxin of plants 131 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SRV7
      UniProtKB/TrEMBL
      A0A178V6V2, A0A1I9LQP3, A0A5S9X8V5, A0A654F3U4
      Conserved Domains (2) summary
      pfam00804
      Location:35 → 240
      Syntaxin
      cl22856
      Location:208 → 274
      SNARE; SNARE motif

    2. NM_001337488.1 → NP_001326903.1  syntaxin of plants 131 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SRV7
      UniProtKB/TrEMBL
      A0A178V6V2, A0A1I9LQP3, A0A5S9X8V5, A0A654F3U4
      Conserved Domains (2) summary
      pfam00804
      Location:35 → 240
      Syntaxin
      cl22856
      Location:208 → 274
      SNARE; SNARE motif
    Nucleotide Protein
    Heading Accession and Version

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