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    EMB3131 Pentatricopeptide repeat (PPR-like) superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827823, updated on 18-Sep-2024

    Summary

    Official Symbol
    EMB3131
    Official Full Name
    Pentatricopeptide repeat (PPR-like) superfamily protein
    Primary source
    TAIR:AT4G20740
    Locus tag
    AT4G20740
    See related
    Araport:AT4G20740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 3131; F21C20.90; F21C20_90
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    Genomic context

    See EMB3131 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (11126140..11128916)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene calmodulin like 42

    General protein information

    Preferred Names
    Pentatricopeptide repeat (PPR-like) superfamily protein
    NP_193806.1
    • Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11126140..11128916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118192.2NP_193806.1  Pentatricopeptide repeat (PPR-like) superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193806.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SVH3
      UniProtKB/TrEMBL
      A0A178V6G4, A0A5S9XUA3, A0A654FR73
      Conserved Domains (2) summary
      PLN03218
      Location:142588
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:265292
      PPR; PPR repeat [structural motif]