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    Mitochondrial glycoprotein family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 5008179, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mitochondrial glycoprotein family protein
    Primary source
    TAIR:AT4G32605
    Locus tag
    AT4G32605
    See related
    Araport:AT4G32605
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (15726201..15727977, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 2Fe-2S ferredoxin-like superfamily protein Neighboring gene C3H4 type zinc finger protein Neighboring gene copper ion binding protein Neighboring gene Enhancer of polycomb-like transcription factor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tandem affinity purification of AtTERT reveals putative interaction partners of plant telomerase in vivo. Majerská J, et al. Protoplasma, 2017 Jul. PMID 27853871
    2. Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Lee CP, et al. Mol Cell Proteomics, 2008 Jul. PMID 18385124
    3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001085012.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    Mitochondrial glycoprotein family protein
    NP_001078481.1
    • Mitochondrial glycoprotein family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 330 Blast hits to 330 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 99; Plants - 196; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15726201..15727977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001085012.3 → NP_001078481.1  Mitochondrial glycoprotein family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078481.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178USV7, A0A5S9XY23, Q8L7K1, Q8LAC7
      Conserved Domains (1) summary
      pfam02330
      Location:66 → 209
      MAM33; Mitochondrial glycoprotein
    Nucleotide Protein
    Heading Accession and Version

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