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    Eukaryotic aspartyl protease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824299, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Eukaryotic aspartyl protease family protein
    Primary source
    TAIR:AT3G51360
    Locus tag
    AT3G51360
    See related
    Araport:AT3G51360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26O13.1
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (19064203..19066734, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Protein phosphatase 2C family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Eukaryotic aspartyl protease family protein
    NP_190704.2
    • Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G17760.1); Has 2513 Blast hits to 2507 proteins in 240 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 280; Plants - 1618; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19064203..19066734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339505.1 → NP_001327008.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGD0, A0A178VI21, A0A1I9LR01, A0A384LKG6

    2. NM_001339506.1 → NP_001327007.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR02

    3. NM_114995.3 → NP_190704.2  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190704.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG91, A0A5S9XKL7, F4J3C1
      Conserved Domains (2) summary
      pfam00026
      Location:90 → 424
      Asp; Eukaryotic aspartyl protease
      cl11403
      Location:89 → 435
      pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases

    4. NM_001339507.1 → NP_001327005.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGD0, A0A1I9LQZ8

    5. NM_001339512.1 → NP_001327003.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG91, A0A1I9LQZ6, A0A5S9XKL7

    6. NM_001339509.1 → NP_001327010.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG91, A0A1I9LR03, A0A5S9XKL7

    7. NM_001339508.1 → NP_001327004.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGD0, A0A1I9LQZ7

    8. NM_001339511.1 → NP_001327009.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR02

    9. NM_001339510.1 → NP_001327006.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG91, A0A1I9LQZ9, A0A5S9XKL7

    10. NM_001339504.1 → NP_001327002.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG91, A0A1I9LQZ5, A0A5S9XKL7
    Nucleotide Protein
    Heading Accession and Version

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