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    ARR6 response regulator 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836412, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARR6
    Official Full Name
    response regulator 6
    Primary source
    TAIR:AT5G62920
    Locus tag
    AT5G62920
    See related
    Araport:AT5G62920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQB2.220; MQB2_220; response regulator 6
    Summary
    Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin.
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    Genomic context

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    See ARR6 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (25252007..25254318, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Xanthine/uracil permease family protein Neighboring gene basic-leucine zipper transcription factor K Neighboring gene RING/U-box superfamily protein Neighboring gene SGNH hydrolase-type esterase superfamily protein Neighboring gene Dof-type zinc finger DNA-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytokinin Response Factor 9 Represses Cytokinin Responses in Flower Development. Swinka C, et al. Int J Mol Sci, 2023 Feb 22. PMID 36901811, Free PMC Article
    2. In planta analysis of a cis-regulatory cytokinin response motif in Arabidopsis and identification of a novel enhancer sequence. Ramireddy E, et al. Plant Cell Physiol, 2013 Jul. PMID 23620480
    3. Characterization of the response of the Arabidopsis response regulator gene family to cytokinin. D'Agostino IB, et al. Plant Physiol, 2000 Dec. PMID 11115887, Free PMC Article
    4. Response regulators implicated in His-to-Asp phosphotransfer signaling in Arabidopsis. Imamura A, et al. Proc Natl Acad Sci U S A, 1998 Mar 3. PMID 9482949, Free PMC Article
    5. ABI4 represses the expression of type-A ARRs to inhibit seed germination in Arabidopsis. Huang X, et al. Plant J, 2017 Jan. PMID 27711992

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Cytokinin Response Factor 9 Represses Cytokinin Responses in Flower Development.
      Title: Cytokinin Response Factor 9 Represses Cytokinin Responses in Flower Development.
    2. ARR6 is direct targets of ABI4.ARR6 negatively regulate abscisic acid-mediated inhibition of germination.
      Title: ABI4 represses the expression of type-A ARRs to inhibit seed germination in Arabidopsis.
    3. Data indicate that one of the immediate early cytokinin response genes is ARR6, which has been shown to be a direct target gene of ARR1, ARR2 and other type-B ARRs.
      Title: In planta analysis of a cis-regulatory cytokinin response motif in Arabidopsis and identification of a novel enhancer sequence.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_125686.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphorelay response regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables phosphorelay response regulator activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytokinin-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cytokinin-activated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphorelay signal transduction system TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cytokinin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular anatomical structure TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    response regulator 6
    NP_201097.1
    • response regulator 6 (ARR6); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 5 (TAIR:AT3G48100.1); Has 47436 Blast hits to 46969 proteins in 2667 species: Archae - 260; Bacteria - 41739; Metazoa - 17; Fungi - 503; Plants - 1416; Viruses - 4; Other Eukaryotes - 3497 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25252007..25254318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125686.3 → NP_201097.1  response regulator 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201097.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZWS6, Q9ZWS8
      UniProtKB/TrEMBL
      A0A178UKS7, A0A384LHQ6, A0A7G2FK65, Q0WSS6
      Conserved Domains (1) summary
      cd17581
      Location:27 → 148
      REC_typeA_ARR; phosphoacceptor receiver (REC) domain of type A Arabidopsis response regulators (ARRs) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZWS6.2

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