U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG11050 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33924, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG11050provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031836
    Locus tag
    Dmel_CG11050
    See related
    AllianceGenome:FB:FBgn0031836
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD22339; Dmel\CG11050
    Summary
    Predicted to enable 5'-deoxynucleotidase activity. Predicted to be involved in deoxyribonucleoside monophosphate catabolic process. Predicted to be located in mitochondrion and nucleus. Orthologous to human HDDC2 (HD domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG11050 in Genome Data Viewer
    Location:
    26F1-26F1; 2-21 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6611011..6617117)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6611011..6617117)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Equilibrative nucleoside transporter 2 Neighboring gene Dipeptidyl peptidase 10 Neighboring gene long non-coding RNA:CR44913 Neighboring gene Dpr-interacting protein iota Neighboring gene uncharacterized protein Neighboring gene Organic anion transporting polypeptide 26F

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Neurofibromin 1 in mushroom body neurons mediates circadian wake drive through activating cAMP-PKA signaling. Machado Almeida P, et al. Nat Commun, 2021 Oct 1. PMID 34599173, Free PMC Article
    2. Spatially varying cis-regulatory divergence in Drosophila embryos elucidates cis-regulatory logic. Combs PA, et al. PLoS Genet, 2018 Nov. PMID 30383747, Free PMC Article
    3. Transcription profiling in Drosophila eyes that overexpress the human glaucoma-associated trabecular meshwork-inducible glucocorticoid response protein/myocilin (TIGR/MYOC). Borrás T, et al. Genetics, 2003 Feb. PMID 12618402, Free PMC Article
    4. Identification of genes associated with resilience/vulnerability to sleep deprivation and starvation in Drosophila. Thimgan MS, et al. Sleep, 2015 May 1. PMID 25409104, Free PMC Article
    5. Molecular characterization of embryonic gonads by gene expression profiling in Drosophila melanogaster. Shigenobu S, et al. Proc Natl Acad Sci U S A, 2006 Sep 12. PMID 16950879, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 5'-deoxynucleotidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables 5'-deoxynucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 5'-deoxynucleotidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in deoxyribonucleoside monophosphate catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG11050-PA
    CG11050-PB
    CG11050-PC
    NP_609052.1
    NP_723193.1
    NP_723194.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      6611011..6617117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135208.6 → NP_609052.1  uncharacterized protein Dmel_CG11050, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609052.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGQ9, Q9VMB3
      Related
      FBpp0078921
      Conserved Domains (1) summary
      pfam13023
      Location:187 → 323
      HD_3; HD domain

    2. NM_164694.3 → NP_723193.1  uncharacterized protein Dmel_CG11050, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723193.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGQ9, Q9VMB3
      Related
      FBpp0078922
      Conserved Domains (1) summary
      pfam13023
      Location:187 → 323
      HD_3; HD domain

    3. NM_164695.3 → NP_723194.1  uncharacterized protein Dmel_CG11050, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723194.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGQ9, Q9VMB3
      Related
      FBpp0078923
      Conserved Domains (1) summary
      pfam13023
      Location:187 → 323
      HD_3; HD domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IGQ9 Q8IGQ9
    Q8MRI6 Q8MRI6
    Q9VMB3 Q9VMB3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools