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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001267045.2 → NP_001253974.1 proteasome activator complex subunit 3 isoform 3
See identical proteins and their annotated locations for NP_001253974.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) has a distinct N-terminus and is longer than isoform 1.
- Source sequence(s)
-
AC016889, AI304773, BI464061, BX640801
- Consensus CDS
-
CCDS59290.1
- UniProtKB/TrEMBL
-
Q6FHK7
- Related
- ENSP00000409487.2, ENST00000441946.6
- Conserved Domains (2) summary
-
- pfam02251
Location:25 → 80
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:120 → 262
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_001330229.2 → NP_001317158.1 proteasome activator complex subunit 3 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC016889, CX866774
- Consensus CDS
-
CCDS82133.1
- UniProtKB/TrEMBL
-
B3KQ25
- Related
- ENSP00000441682.1, ENST00000545225.5
- Conserved Domains (1) summary
-
- pfam02252
Location:48 → 190
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_005789.4 → NP_005780.2 proteasome activator complex subunit 3 isoform 1
See identical proteins and their annotated locations for NP_005780.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the predominant isoform (1).
- Source sequence(s)
-
AC016889, AI304773, BC001423, BI464061
- Consensus CDS
-
CCDS45689.1
- UniProtKB/Swiss-Prot
- A8K9A3, O35563, P61289, P97373, Q12920, Q13172, Q9BQD9
- UniProtKB/TrEMBL
- Q6FHK7, V9HWJ8
- Related
- ENSP00000466794.1, ENST00000590720.6
- Conserved Domains (2) summary
-
- pfam02251
Location:9 → 69
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:109 → 251
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_176863.3 → NP_789839.1 proteasome activator complex subunit 3 isoform 2
See identical proteins and their annotated locations for NP_789839.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), uses ans alternate in-frame splice site, compared to variant 1. The resulting isoform (2) is longer than isoform 1.
- Source sequence(s)
-
AC016889, AI304773, U11292
- Consensus CDS
-
CCDS11442.1
- UniProtKB/TrEMBL
-
Q6FHK7
- Related
- ENSP00000293362.1, ENST00000293362.7
- Conserved Domains (2) summary
-
- pfam02251
Location:12 → 68
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:108 → 265
- PA28_beta; Proteasome activator pa28 beta subunit
RNA
-
NR_049772.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC016889, AI304773, AK303211, BI464061
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
42833397..42843760
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047435096.1 → XP_047291052.1 proteasome activator complex subunit 3 isoform X1
- UniProtKB/TrEMBL
-
Q6FHK7
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
43690536..43700899
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054314668.1 → XP_054170643.1 proteasome activator complex subunit 3 isoform X1
- UniProtKB/TrEMBL
-
Q6FHK7