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    ABIL1 ABI-1-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819230, updated on 18-Sep-2024

    Summary

    Official Symbol
    ABIL1
    Official Full Name
    ABI-1-like 1
    Primary source
    TAIR:AT2G46225
    Locus tag
    AT2G46225
    See related
    Araport:AT2G46225
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ABI-1-like 1
    Summary
    Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins.
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    Genomic context

    See ABIL1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (18981911..18984292)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene U11/U12 small nuclear ribonucleoprotein Neighboring gene Fatty acid/sphingolipid desaturase Neighboring gene DUF2358 family protein (DUF2358) Neighboring gene ncRNA Neighboring gene PIN domain-like family protein Neighboring gene BCL-2-associated athanogene 6 Neighboring gene myosin heavy chain-like protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001125062.1
    NM_001202827.1
    NM_130185.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within actin nucleation TAS
    Traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within trichome morphogenesis TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of SCAR complex TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    ABI-1-like 1
    NP_001118534.1
    • ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001189756.1
    • ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1).
    NP_566067.1
    • ABI-1-like 1 (ABIL1); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1); Has 541 Blast hits to 541 proteins in 65 species: Archae - 0; Bacteria - 4; Metazoa - 369; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18981911..18984292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202827.1NP_001189756.1  ABI-1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189756.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4II55
    2. NM_001125062.1NP_001118534.1  ABI-1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H5V3
    3. NM_130185.3NP_566067.1  ABI-1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566067.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWF6, Q8S8M5
      UniProtKB/TrEMBL
      A0A178VQI3, A0A384LLB1, Q1EC71