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    ESL1 ERD (early response to dehydration) six-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837413, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ESL1
    Official Full Name
    ERD (early response to dehydration) six-like 1
    Primary source
    TAIR:AT1G08920
    Locus tag
    AT1G08920
    See related
    Araport:AT1G08920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ERD (early response to dehydration) six-like 1; F7G19.20; F7G19_20
    Summary
    Encodes ESL1, a transporter for monosaccharides.
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    Genomic context

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    See ESL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Sequence:
    Chromosome: 1; NC_003070.9 (2867203..2870745)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Major facilitator superfamily protein Neighboring gene Phosphoglycerate mutase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analysis of an Arabidopsis thaliana abiotic stress-inducible facilitated diffusion transporter for monosaccharides. Yamada K, et al. J Biol Chem, 2010 Jan 8. PMID 19901034, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035928.1
    NM_100764.4
    NM_179287.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables monosaccharide transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within monosaccharide transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ERD (early response to dehydration) six-like 1
    NP_001031005.1
    • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_563829.1
    • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 23660 Blast hits to 23155 proteins in 1879 species: Archae - 378; Bacteria - 9422; Metazoa - 4252; Fungi - 6142; Plants - 2335; Viruses - 0; Other Eukaryotes - 1131 (source: NCBI BLink).
    NP_849618.1
    • ERD (early response to dehydration) six-like 1 (ESL1); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 22673 Blast hits to 22189 proteins in 1824 species: Archae - 355; Bacteria - 8744; Metazoa - 4150; Fungi - 6023; Plants - 2283; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2867203..2870745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100764.4 → NP_563829.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563829.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178WFZ8, B1GXJ7, O04037, Q94KE0, Q9SCW9
      UniProtKB/TrEMBL
      A0A384L1H0, A0A5S9TCG9, A0A654E813
      Conserved Domains (1) summary
      cd17358
      Location:33 → 460
      MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

    2. NM_179287.2 → NP_849618.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849618.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654E813
      Conserved Domains (2) summary
      cd06174
      Location:36 → 457
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam00083
      Location:36 → 469
      Sugar_tr; Sugar (and other) transporter

    3. NM_001035928.1 → NP_001031005.1  ERD (early response to dehydration) six-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031005.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654E813, A8MR75
      Conserved Domains (2) summary
      cd06174
      Location:36 → 425
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam00083
      Location:36 → 425
      Sugar_tr; Sugar (and other) transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94KE0.1

    Gene LinkOut

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