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    Hydrolase-like protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839787, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Hydrolase-like protein family
    Primary source
    TAIR:AT1G29120
    Locus tag
    AT1G29120
    See related
    Araport:AT1G29120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT1G29130; F28N24.29; F28N24_29; UP9
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (10174162..10178521)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Cysteine proteinases superfamily protein Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene non-ATPase subunit 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome analysis of peroxisomes from etiolated Arabidopsis seedlings identifies a peroxisomal protease involved in β-oxidation and development. Quan S, et al. Plant Physiol, 2013 Dec. PMID 24130194, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036030.1
    NM_001198181.1
    NM_001332836.1
    NM_001332837.1
    NM_001332838.1
    NM_001332839.1
    NM_102653.4
    NM_202206.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Hydrolase-like protein family
    NP_001031107.1
    • Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001185110.1
    • Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1).
    NP_001319105.1
    • Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_174207.2
    • Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 731 Blast hits to 728 proteins in 173 species: Archae - 0; Bacteria - 8; Metazoa - 122; Fungi - 309; Plants - 167; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    NP_973935.1
    • Hydrolase-like protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10174162..10178521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102653.4 → NP_174207.2  Hydrolase-like protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174207.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4M0, Q67XR9, Q8RWD3
      Conserved Domains (1) summary
      pfam05057
      Location:97 → 324
      DUF676; Putative serine esterase (DUF676)

    2. NM_202206.2 → NP_973935.1  Hydrolase-like protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973935.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4M0, Q67XR9, Q8RWD3
      Conserved Domains (1) summary
      pfam05057
      Location:97 → 324
      DUF676; Putative serine esterase (DUF676)

    3. NM_001198181.1 → NP_001185110.1  Hydrolase-like protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185110.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HZW3, Q8RWD3
      Conserved Domains (1) summary
      pfam05057
      Location:97 → 314
      DUF676; Putative serine esterase (DUF676)

    4. NM_001332837.1 → NP_001321354.1  Hydrolase-like protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQN1

    5. NM_001332836.1 → NP_001319105.1  Hydrolase-like protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HZW7, Q682W0
      Conserved Domains (1) summary
      pfam05057
      Location:97 → 324
      DUF676; Putative serine esterase (DUF676)

    6. NM_001332839.1 → NP_001321355.1  Hydrolase-like protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6A8, A0A384LQC8, A0A7G2DWJ2, C0Z2A9, Q8RWD3

    7. NM_001332838.1 → NP_001321356.1  Hydrolase-like protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQV0, Q8RWD3

    8. NM_001036030.1 → NP_001031107.1  Hydrolase-like protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031107.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HZW6, Q682W0
      Conserved Domains (1) summary
      pfam05057
      Location:97 → 324
      DUF676; Putative serine esterase (DUF676)
    Nucleotide Protein
    Heading Accession and Version

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