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    SAG18 senescence associated gene 18 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843459, updated on 18-Sep-2024

    Summary

    Official Symbol
    SAG18
    Official Full Name
    senescence associated gene 18
    Primary source
    TAIR:AT1G71190
    Locus tag
    AT1G71190
    See related
    Araport:AT1G71190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N20.18; F23N20_18; senescence associated gene 18
    Summary
    Senescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication.
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    Genomic context

    See SAG18 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (26833406..26835060, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 7 Neighboring gene 6-phosphogluconate dehydrogenase family protein Neighboring gene 6-phosphogluconate dehydrogenase family protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001198440.1

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in ceramide metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    senescence associated gene 18
    NP_001185369.1
    • senescence associated gene 18 (SAG18); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Alkaline phytoceramidase (aPHC) (TAIR:AT5G11870.2).
    NP_177275.1
    • senescence associated gene 18 (SAG18); FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); BEST Arabidopsis thaliana protein match is: Alkaline phytoceramidase (aPHC) (TAIR:AT5G11870.2); Has 182 Blast hits to 182 proteins in 61 species: Archae - 0; Bacteria - 88; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26833406..26835060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105788.4NP_177275.1  senescence associated gene 18 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177275.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEK0, Q9C989
    2. NM_001198440.1NP_001185369.1  senescence associated gene 18 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185369.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I8F7