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    CAT4 cationic amino acid transporter 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821176, updated on 18-Sep-2024

    Summary

    Official Symbol
    CAT4
    Official Full Name
    cationic amino acid transporter 4
    Primary source
    TAIR:AT3G03720
    Locus tag
    AT3G03720
    See related
    Araport:AT3G03720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cationic amino acid transporter 4; F20H23.25; F20H23_25
    Summary
    Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
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    Genomic context

    See CAT4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Sequence:
    Chromosome: 3; NC_003074.8 (925556..930002, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Plasma-membrane choline transporter family protein Neighboring gene polyribonucleotide nucleotidyltransferase Neighboring gene F-box/kelch-repeat protein, putative (DUF295) Neighboring gene F-box/kelch-repeat protein, putative (DUF295)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001161114.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables basic amino acid transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cationic amino acid transporter 4
    NP_001154586.1
    • cationic amino acid transporter 4 (CAT4); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Protein of unknown function DUF295 (InterPro:IPR005174), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 2 (TAIR:AT1G58030.1); Has 38139 Blast hits to 35862 proteins in 2359 species: Archae - 591; Bacteria - 30521; Metazoa - 2149; Fungi - 2872; Plants - 748; Viruses - 0; Other Eukaryotes - 1258 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      925556..930002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001161114.2NP_001154586.1  cationic amino acid transporter 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154586.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J170, Q8W4K3, Q9SRU9
      Conserved Domains (2) summary
      TIGR00906
      Location:4579
      2A0303; cationic amino acid transport permease
      pfam13906
      Location:528578
      AA_permease_C; C-terminus of AA_permease