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    Amino acid dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841597, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Amino acid dehydrogenase family protein
    Primary source
    TAIR:AT1G51720
    Locus tag
    AT1G51720
    See related
    Araport:AT1G51720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19C24.7; F19C24_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    18
    Sequence:
    Chromosome: 1; NC_003070.9 (19180744..19186532)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DOF zinc finger protein 1 Neighboring gene ubiquitin-specific protease 6 Neighboring gene Ubiquitin-conjugating enzyme family protein Neighboring gene syntaxin of plants 81 Neighboring gene Tudor/PWWP/MBT superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001333496.1
    NM_001333497.1
    NM_001333498.1
    NM_104050.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Amino acid dehydrogenase family protein
    NP_175583.2
    • Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19180744..19186532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104050.3 → NP_175583.2  Amino acid dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175583.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0P3, A0A5S9WLF0, F4I9M9
      Conserved Domains (3) summary
      PRK09414
      Location:190 → 637
      PRK09414; glutamate dehydrogenase; Provisional
      pfam02812
      Location:242 → 370
      ELFV_dehydrog_N; Glu/Leu/Phe/Val dehydrogenase, dimerization domain
      cl21454
      Location:380 → 636
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. NM_001333496.1 → NP_001323113.1  Amino acid dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0P3, A0A1P8AW36, A0A5S9WLF0

    3. NM_001333497.1 → NP_001323112.1  Amino acid dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0P3, A0A5S9WLF0, F4I9M9

    4. NM_001333498.1 → NP_001323114.1  Amino acid dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AW38
    Nucleotide Protein
    Heading Accession and Version

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