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    CRK ARP2/3 complex 16 kDa subunit (p16-Arc) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828087, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRK
    Official Full Name
    ARP2/3 complex 16 kDa subunit (p16-Arc)
    Primary source
    TAIR:AT4G01710
    Locus tag
    AT4G01710
    See related
    Araport:AT4G01710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARPC5; CROOKED; T15B16.22; T15B16_22
    Summary
    belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.
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    Genomic context

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    See CRK in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (735653..736965)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Chitinase family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene WRKY family transcription factor Neighboring gene DHHC-type zinc finger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis CROOKED encodes for the smallest subunit of the ARP2/3 complex and controls cell shape by region specific fine F-actin formation. Mathur J, et al. Development, 2003 Jul. PMID 12783786
    2. Regulation of cell expansion by the DISTORTED genes in Arabidopsis thaliana: actin controls the spatial organization of microtubules. Schwab B, et al. Mol Genet Genomics, 2003 Jun. PMID 12690443
    3. Breaking the WAVE complex: the point of Arabidopsis trichomes. Szymanski DB. Curr Opin Plant Biol, 2005 Feb. PMID 15653407
    4. The actin cytoskeleton is required to elaborate and maintain spatial patterning during trichome cell morphogenesis in Arabidopsis thaliana. Mathur J, et al. Development, 1999 Dec. PMID 10572033
    5. The role of Arabidopsis SCAR genes in ARP2-ARP3-dependent cell morphogenesis. Uhrig JF, et al. Development, 2007 Mar. PMID 17267444

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_116401.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables actin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within actin cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within actin filament organization TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within actin filament polymerization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within multidimensional cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within trichome morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARP2/3 complex 16 kDa subunit (p16-Arc)
    NP_567216.1
    • CROOKED (CRK); CONTAINS InterPro DOMAIN/s: ARP2/3 complex 16kDa subunit (p16-Arc) (InterPro:IPR006789); BEST Arabidopsis thaliana protein match is: ARP2/3 complex 16 kDa subunit (p16-Arc) (TAIR:AT5G65274.1); Has 360 Blast hits to 360 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 256; Fungi - 50; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      735653..736965
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116401.3 → NP_567216.1  ARP2/3 complex 16 kDa subunit (p16-Arc) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567216.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q941F3, Q9M117
      UniProtKB/TrEMBL
      A0A178UZC8, A0A5S9XNY8
      Conserved Domains (1) summary
      pfam04699
      Location:3 → 127
      P16-Arc; ARP2/3 complex 16 kDa subunit (p16-Arc)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M117.2

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